miRBase entry: cfa-mir-214

Stem-loop cfa-mir-214

Accession

MI0010342

Description

Canis familiaris cfa-mir-214 precursor miRNA

Sequence

ggccuggcuggacggaguugucaugugucugccugucuacacuugcugugcagaacauccgcucaccuguACAGCAGGCACAGACAGGCAGUcacaugacaacccagccu
.....((((((.....(((((((((((.((((((((((...((((((((((((.............))))))))))))...)))))))))).))))))))))))))))).

Structure

ggccu      acgga           u          aca            aacau 
     ggcugg     guugucaugug cugccugucu   cuugcugugcag     c
     ||||||     ||||||||||| ||||||||||   ||||||||||||     c
     ccgacc     caacaguacac GACGGACAGA   GGACGACAuguc     g
----u      -----           U          CAC            cacuc

Annotation confidence Not enough data

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Genome context

chr7: 26818559-26818668 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-214

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-214

Accession	MIMAT0009847
Description	Canis familiaris cfa-miR-214 mature miRNA
Sequence	71 - ACAGCAGGCACAGACAGGCAGU - 92
Evidence	not_experimental

References

PubMed ID: 18215311
miRNAminer: a tool for homologous microRNA gene search
"Artzi S, Kiezun A, Shomron N"
"BMC Bioinformatics (2008) 9:39