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miRBase entry: aga-mir-988
How is the hairpin structure generated?
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We have generated a dot-bracket structure for each sequence using RNAfold.
Unambiguous secondary structure.
Parsed and ASCII art drawn.
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Stem-loop
aga-mir-988
Accession
MI0010598
Description
Anopheles gambiae
aga-mir-988 precursor miRNA
Literature search
1 open access papers
mention aga-mir-988
(1 sentences)
Sequence
cuguggagcauuggacauugccgguguguguuuugugacaaugagauuuaauaguuuaaguucauCCCCUUGUUGCAAACCUCACGCuggcgguguuuccga
...((((......(((((((((((((((.(.((((((((((.(((((((((....)))))))..))...)))))))))).).))))))))))))))))))).AUGGCUGACGGAAGAUAGCCAGCGUUUGUUUUAUUUGGUAUGUUACUACUGCUGCAAGCUAUAUCAUAAGACACACGCGGCUAUUUUCCGCAACCCGA
Structure
Error: Sequence and structure lengths do not match for aga-mir-988.
Annotation confidence
Not enough data
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Genome context
chr2L: 39359054-39359155 [+]
Database links
Mature
aga-miR-988
Accession
MIMAT0010104
Description
Anopheles gambiae
aga-miR-988 mature miRNA
Sequence
66 - CCCCUUGUUGCAAACCUCACGC - 87
Evidence
not_experimental
References