Stem-loop cbr-mir-1822

Accession

MI0010987

Description

Caenorhabditis briggsae cbr-mir-1822 precursor miRNA

Sequence

gucuagaaagguccgagagccuaucccggaacgcuaucgguugcacuuuucaaaaaacCGAGCUGCCCGGGGAUAGACUCUuggcuucagaaagac
((((....(((.(((((((.(((((((.(...((..((((((.............))))))...)).).))))))).)))))))))).....))))

Structure

    -agaa   u       c       g aac  -ua      gcacu 
gucu     agg ccgagag cuauccc g   gc   ucgguu     u
||||     ||| ||||||| ||||||| |   ||   ||||||     u
caga     uuc gguUCUC GAUAGGG C   CG   AGCcaa     u
    aagac   -       A       G --C  UCG      aaaac 

Annotation confidence Not enough data

Genome context

chrII: 9704335-9704430 [-]

Mature cbr-miR-1822

• Accession: MIMAT0011481
• Description: Caenorhabditis briggsae cbr-miR-1822 mature miRNA
• Sequence: 59 - CGAGCUGCCCGGGGAUAGACUCU - 81
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074