Stem-loop cbr-mir-2225

Accession

MI0011015

Description

Caenorhabditis briggsae cbr-mir-2225 precursor miRNA

Sequence

agucccucucuuugucACCGCUUCCUUCCUUGCGCACaccuaauuccaguaguaaaggaugUGGCAAGACAGGCAGCGGUAGauaagggagauugagaca
.(((((((.(((((((((((((.(((..(((((.(((((((..............))).)))))))))..))).)))))).))))))))))...).))).

Structure

a   - ---   u       -      U   UC     G    -   aauucc 
 guc c   cuc cuuuguc ACCGCU CCU  CUUGC CACa ccu      a
 ||| |   ||| ||||||| |||||| |||  ||||| |||| |||       
 cag g   gag ggaauaG UGGCGA GGA  GAACG GUgu gga      g
a   a uua   -       A      C   CA     -    a   aaugau 

Annotation confidence Not enough data

Genome context

chrI: 6952711-6952810 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cbr-mir-2225

Mature cbr-miR-2225-5p

• Accession: MIMAT0011497
• Description: Caenorhabditis briggsae cbr-miR-2225-5p mature miRNA
• Sequence: 17 - ACCGCUUCCUUCCUUGCGCAC - 37
• Evidence: experimental ; 454 [1]

Mature cbr-miR-2225-3p

• Accession: MIMAT0011498
• Description: Caenorhabditis briggsae cbr-miR-2225-3p mature miRNA
• Sequence: 62 - UGGCAAGACAGGCAGCGGUAG - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074