Stem-loop crm-mir-72

Accession

MI0011078

Description

Caenorhabditis remanei crm-mir-72 precursor miRNA

Gene family

MIPF0000277; mir-72

Literature search

1 open access papers mention crm-mir-72
(1 sentences)

Sequence

ccguaagacucgucaaagcuAGGCAAGAUGUUGGCAUAGCUGaaugcaauuuggcgcucAGCUCGGCCACAUACUGCCACGcauuggcuagagucuaauuuuuaucccuaugg
((((((((((((((((.((..((((..((((.(((..((((((.(((......))).))))))..)))))))..))))..)).)))))..))))))............)))))

Structure

     ------------      --     a  uA    AG    U   AU      a   aa 
ccgua            agacuc  gucaa gc  GGCA  AUGU GGC  AGCUGa ugc  u
|||||            ||||||  ||||| ||  ||||  |||| |||  |||||| |||   
gguau            ucugag  cgguu cG  CCGU  UACA CCG  UCGAcu gcg  u
     cccuauuuuuaa      au     a  CA    CA    -   GC      c   gu 

Annotation confidence Not enough data

Genome context

Crem_Contig94: 152301-152413 [-]

Mature crm-miR-72-5p

• Accession: MIMAT0011567
• Description: Caenorhabditis remanei crm-miR-72-5p mature miRNA
• Sequence: 21 - AGGCAAGAUGUUGGCAUAGCUG - 42
• Evidence: experimental ; 454 [1]

Mature crm-miR-72-3p

• Accession: MIMAT0011568
• Description: Caenorhabditis remanei crm-miR-72-3p mature miRNA
• Sequence: 60 - AGCUCGGCCACAUACUGCCACG - 81
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074