Stem-loop crm-mir-784

Accession

MI0011083

Description

Caenorhabditis remanei crm-mir-784 precursor miRNA

Gene family

MIPF0000999; mir-784

Literature search

1 open access papers mention crm-mir-784
(4 sentences)

Sequence

acuuugcguuaccguaUGGCACAAUACUUGCAUGUAGacgugacguuugugaucUACAUACAUCUAUUGAGCCAUCcgguauucuugcaaaguu
((((((((.(((((.(((((.(((((..((.(((((((..(.((....)).)))))))).))..))))).))))).)))))....)))))))).

Structure

-        ---u     u     A     CU  C       cg g  g 
 acuuugcg    uaccg aUGGC CAAUA  UG AUGUAGa  u ac u
 ||||||||    ||||| ||||| |||||  || |||||||  | ||  
 ugaaacgu    auggc UACCG GUUAU  AC UACAUcu  a ug u
u        ucuu     C     A     CU  A       -- g  u 

Annotation confidence Not enough data

Genome context

Crem_Contig76: 9646-9739 [-]

Mature crm-miR-784-5p

• Accession: MIMAT0011575
• Description: Caenorhabditis remanei crm-miR-784-5p mature miRNA
• Sequence: 17 - UGGCACAAUACUUGCAUGUAG - 37
• Evidence: experimental ; 454 [1]

Mature crm-miR-784-3p

• Accession: MIMAT0011576
• Description: Caenorhabditis remanei crm-miR-784-3p mature miRNA
• Sequence: 55 - UACAUACAUCUAUUGAGCCAUC - 76
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074