Stem-loop hbv-mir-B2RC

Accession

MI0011555

Description

Herpes B virus hbv-mir-B2RC precursor miRNA

Sequence

gcccgccgucucucguucccggccgugcggucgagccGCGGCCCCUGGGCGCGGAGAGacgggcgcggg
.(((((((((((((((.(((((((..(((((...)))))))))...))).)).))))))).)))).)).

Structure

g  -    -       -  u   ---    gu     c 
 cc cgcc gucucuc gu ccc   ggcc  gcggu  
 || |||| ||||||| || |||   ||||  ||||| g
 gg gcgg caGAGAG CG GGG   CCGG  CGccg  
g  c    g       G  C   UCC    --     a 

Annotation confidence Not enough data

Genome context

NC_004812: 62045-62113 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hbv-mir-B2RC

Mature hbv-miR-B2RC

• Accession: MIMAT0012170
• Description: Herpes B virus hbv-miR-B2RC mature miRNA
• Sequence: 38 - GCGGCCCCUGGGCGCGGAGAG - 58
• Evidence: experimental ; Northern [1]

References

1. PubMed ID: 19144716
   Discovery of herpes B virus-encoded microRNAs
   "Besecker MI, Harden ME, Li G, Wang XJ, Griffiths A"
   "J Virol (2009) 83:3413-3416