miRBase entry: cte-mir-2e-1

Stem-loop cte-mir-2e-1

Accession

MI0012113

Description

Capitella teleta cte-mir-2e-1 precursor miRNA

Sequence

gcuugcuuuugcgaauauucugcgcucugaguggcugugauauguucaguugagucagcaUAUCACAGUCAAUGCUUUGGGCUCagaauauucugcucuc
..........((((((((((((.((((.((((((((((((((((((.(......).))))))))))))))...)))).)))).)))))))))).))....

Structure

gcuugcuuuu  -          c    u    ---              c gu 
          gc gaauauucug gcuc gagu   ggcugugauauguu a  u
          || |||||||||| |||| ||||   |||||||||||||| |   
          cg cuuauaagaC CGGG UUCG   CUGACACUAUacga u  g
------cucu  u          U    U    UAA              c ga

Annotation confidence Not enough data

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Genome context

KB304652.1: 917-1016 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cte-mir-2e-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cte-miR-2e

Accession	MIMAT0013527
Description	Capitella teleta cte-miR-2e mature miRNA
Sequence	61 - UAUCACAGUCAAUGCUUUGGGCUC - 84
Evidence	experimental 454 [1]

References

PubMed ID: 19755470
MicroRNAs resolve an apparent conflict between annelid systematics and their fossil record
"Sperling EA, Vinther J, Moy VN, Wheeler BM, Semon M, Briggs DE, Peterson KJ"
"Proc Biol Sci (2009) 276:4315-4322