Stem-loop isc-mir-153

Accession

MI0012268

Description

Ixodes scapularis isc-mir-153 precursor miRNA

Literature search

1 open access papers mention isc-mir-153
(2 sentences)

Sequence

cuuggccucucuccguugcgcucaucauuuuugugauuggugcaauugugcaccagcaaaUUGCAUAGUCACAAAAGUGAUGgucgcggcggggcugcucu
...(((....((((((((((.((((((((((((((((((.(((((((.(((....)))))))))))))))))))))))))))).))))))))))..)))..

Structure

cuu   cucu          c                  g       g   a 
   ggc    cuccguugcg ucaucauuuuugugauug ugcaauu ugc c
   |||    |||||||||| |||||||||||||||||| ||||||| |||  
   ucg    ggggcggcgc gGUAGUGAAAACACUGAU ACGUUaa acg c
-uc   --uc          u                  -       -   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature isc-miR-153

• Accession: MIMAT0012688
• Description: Ixodes scapularis isc-miR-153 mature miRNA
• Sequence: 61 - UUGCAUAGUCACAAAAGUGAUG - 82
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68