Stem-loop eca-mir-206-2

Accession

MI0012845

Description

Equus caballus eca-mir-206-2 precursor miRNA

Literature search

3 open access papers mention eca-mir-206-2
(12 sentences)

Sequence

aggccacaugcuucuuuauauccccauacggauuacuuugcuaUGGAAUGUAAGGAAGUGUGUGGuuuc
.((((((((((((((((((((..(((((((((....)))).))))).))))))))))))))))))))..

Structure

-a                    cc     -    u 
  ggccacaugcuucuuuauau  ccaua cgga u
  ||||||||||||||||||||  ||||| ||||  
  uuGGUGUGUGAAGGAAUGUA  GGUau guuu a
cu                    -A     c    c 

Annotation confidence Not enough data

Genome context

chr20: 49820595-49820663 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-206-2

Mature eca-miR-206

• Accession: MIMAT0013098
• Description: Equus caballus eca-miR-206 mature miRNA
• Sequence: 44 - UGGAAUGUAAGGAAGUGUGUGG - 65
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131