Stem-loop eca-mir-374b

Accession

MI0012960

Description

Equus caballus eca-mir-374b precursor miRNA

Literature search

3 open access papers mention eca-mir-374b
(12 sentences)

Sequence

60 reads, 9 reads per million, 1 experiments

acucggauggAUAUAAUACAACCUGCUAAGUGuccuagcacuuaucagguuguauuaucauuguccgugucu
((.(((((((..(((((((((((((.(((((((....))))))).)))))))))))))..))))))).))..

Structure

--  u       AU             C       c 
  ac cggaugg  AUAAUACAACCUG UAAGUGu c
  || |||||||  ||||||||||||| |||||||  
  ug gccuguu  uauuauguuggac auucacg u
uc  u       ac             u       a 

Annotation confidence Not enough data

Genome context

chrX: 55435984-55436055 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-374b

Mature eca-miR-374b

• Accession: MIMAT0013214
• Description: Equus caballus eca-miR-374b mature miRNA
• Sequence: 11 - AUAUAAUACAACCUGCUAAGUG - 32
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131