Stem-loop bhv1-mir-B6

Accession

MI0013178

Description

Bovine herpesvirus 1 bhv1-mir-B6 precursor miRNA

Gene family

MIPF0001260; mir-B6

Sequence

cgcggagggcAAGUGCCCGACGCGGGGAACGUGgcggcggacgccagcgccgCGUCUCCGGCGCCGGGUCCUGGCccuccgcg
((((((((((.((.(((((.(((.(((.((((((((..((...))..)))))))).))).))).))))).)).))))))))))

Structure

          A  U     A   G   A        gc  a 
cgcggagggc AG GCCCG CGC GGG ACGUGgcg  gg  
|||||||||| || ||||| ||| ||| ||||||||  || c
gcgccuccCG UC UGGGC GCG CCU UGCgccgc  cc  
          G  C     C   G   C        ga  g 

Annotation confidence Not enough data

Genome context

Unknown

Mature bhv1-miR-B6-5p

• Accession: MIMAT0013967
• Description: Bovine herpesvirus 1 bhv1-miR-B6-5p mature miRNA
• Sequence: 11 - AAGUGCCCGACGCGGGGAACGUG - 33
• Evidence: experimental ; Illumina [1]

Mature bhv1-miR-B6-3p

• Accession: MIMAT0013968
• Description: Bovine herpesvirus 1 bhv1-miR-B6-3p mature miRNA
• Sequence: 53 - CGUCUCCGGCGCCGGGUCCUGGC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19793906
   Characterization of microRNAs encoded by the bovine herpesvirus 1 genome
   "Glazov EA, Horwood PF, Assavalapsakul W, Kongsuwan K, Mitchell RW, Mitter N, Mahony TJ"
   "J Gen Virol (2010) 91:32-41