Stem-loop bhv1-mir-B8

Accession

MI0013180

Description

Bovine herpesvirus 1 bhv1-mir-B8 precursor miRNA

Gene family

MIPF0002021; mir-B8

Sequence

cccccgCGCGGGCAAAAAAUCCAAUGGCggauaaucgagagcUAUUGUAUUUUUGCGCCAGCGGGgg
(((((((..(((((((((...(((((((............)))))))..))))))).)).)))))))

Structure

       GC  -       AUC       ggaua 
cccccgC  GG GCAAAAA   CAAUGGC     a
|||||||  || |||||||   |||||||      
ggGGGCG  CC CGUUUUU   GUUAUcg     u
       -A  G       -AU       agagc 

Annotation confidence Not enough data

Genome context

Unknown

Mature bhv1-miR-B8-5p

• Accession: MIMAT0013970
• Description: Bovine herpesvirus 1 bhv1-miR-B8-5p mature miRNA
• Sequence: 7 - CGCGGGCAAAAAAUCCAAUGGC - 28
• Evidence: experimental ; Illumina [1]

Mature bhv1-miR-B8-3p

• Accession: MIMAT0013971
• Description: Bovine herpesvirus 1 bhv1-miR-B8-3p mature miRNA
• Sequence: 43 - UAUUGUAUUUUUGCGCCAGCGGG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19793906
   Characterization of microRNAs encoded by the bovine herpesvirus 1 genome
   "Glazov EA, Horwood PF, Assavalapsakul W, Kongsuwan K, Mitchell RW, Mitter N, Mahony TJ"
   "J Gen Virol (2010) 91:32-41