Stem-loop esi-MIR3461

Accession

MI0014681

Description

Ectocarpus siliculosus esi-MIR3461 precursor miRNA

Sequence

gucuUCGACGGCGAGGUUGGACUAGcagcggaaaaucuggacgcgauuuuggaggggcaugcaacgguuguaugucccuccaacacccccuccguuucuuccgcugccaaUCCGACCUCGCUGUAGGAGAA
.(((((.((((((((((((((...(((((((((....((((.......((((((((((((((((...)))))))))))))))).......))))....)))))))))...)))))))))))))).))))).

Structure

g     G              CUA         aauc    cgcgauu                c 
 ucuUC ACGGCGAGGUUGGA   Gcagcggaa    ugga       uuggaggggcaugcaa  
 ||||| ||||||||||||||   |||||||||    ||||       |||||||||||||||| g
 AGAGG UGUCGCUCCAGCCU   cgucgccuu    gccu       aaccucccuguauguu  
A     A              aac         cuuu    cccccac                g 

Annotation confidence Not enough data

Genome context

sctg_41: 561195-561325 [+]

Mature esi-miR3461-5p

• Accession: MIMAT0017765
• Description: Ectocarpus siliculosus esi-miR3461-5p mature miRNA
• Sequence: 5 - UCGACGGCGAGGUUGGACUAG - 25
• Evidence: experimental ; Illumina [1]

Mature esi-miR3461-3p

• Accession: MIMAT0017766
• Description: Ectocarpus siliculosus esi-miR3461-3p mature miRNA
• Sequence: 111 - UCCGACCUCGCUGUAGGAGAA - 131
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20520714
   The Ectocarpus genome and the independent evolution of multicellularity in brown algae
   "Cock JM, Sterck L, Rouze P, Scornet D, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, Boyen C, Brownlee C, Carrano CJ, Charrier B, Cho GY, Coelho SM, Collen J, Corre E, Da Sil"
   "Nature (2010) 465:617-621