Stem-loop esi-MIR3453

Accession

MI0014688

Description

Ectocarpus siliculosus esi-MIR3453 precursor miRNA

Sequence

gacgaacagcUUCUCCUCGAUCGCCCGCCUGcacaaguauauauacaagccuaucguaccauauacuugugcaGGCGGACGAUUGAGGAGAAGUUguccgucc
((((.((((((((((((((((((.((((((((((((((((((.(((.........)))..)))))))))))))))))).)))))))))))))))))).)))).

Structure

-    a                  C                  -a   aag 
 gacg acagcUUCUCCUCGAUCG CCGCCUGcacaaguauau  uac   c
 |||| |||||||||||||||||| ||||||||||||||||||  |||   c
 cugc ugUUGAAGAGGAGUUAGC GGCGGacguguucauaua  aug   u
c    c                  A                  cc   cua 

Annotation confidence Not enough data

Genome context

sctg_166: 350124-350226 [-]

Mature esi-miR3453-5p

• Accession: MIMAT0017779
• Description: Ectocarpus siliculosus esi-miR3453-5p mature miRNA
• Sequence: 11 - UUCUCCUCGAUCGCCCGCCUG - 31
• Evidence: experimental ; Illumina [1]

Mature esi-miR3453-3p

• Accession: MIMAT0017780
• Description: Ectocarpus siliculosus esi-miR3453-3p mature miRNA
• Sequence: 74 - GGCGGACGAUUGAGGAGAAGUU - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20520714
   The Ectocarpus genome and the independent evolution of multicellularity in brown algae
   "Cock JM, Sterck L, Rouze P, Scornet D, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, Boyen C, Brownlee C, Carrano CJ, Charrier B, Cho GY, Coelho SM, Collen J, Corre E, Da Sil"
   "Nature (2010) 465:617-621