Stem-loop esi-MIR3465

Accession

MI0014694

Description

Ectocarpus siliculosus esi-MIR3465 precursor miRNA

Sequence

gcagacCAACUGAAGAUCUACCAGGACaagaggcgccccaaucgcaacugcccgcgcugcaacuggccccgcagucgcagcgcgggcaguugcgaucggcgcacuucuugUCCUGGUAGAUCUUCAGUUGGUCugca
(((((((((((((((((((((((((((((((((.((.((.((((((((((((((((((((.((((......)))).)))))))))))))))))))).)).)).))))))))))))))))))))))))))))))))).

Structure

-                                 c  c  a                    a    gc 
 gcagacCAACUGAAGAUCUACCAGGACaagagg gc cc aucgcaacugcccgcgcugc acug  c
 ||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||||   
 cguCUGGUUGACUUCUAGAUGGUCCUguucuuc cg gg uagcguugacgggcgcgacg ugac  c
a                                 a  c  c                    c    gc 

Annotation confidence Not enough data

Genome context

sctg_58: 477227-477363 [+]

Mature esi-miR3465-5p

• Accession: MIMAT0017791
• Description: Ectocarpus siliculosus esi-miR3465-5p mature miRNA
• Sequence: 7 - CAACUGAAGAUCUACCAGGAC - 27
• Evidence: experimental ; Illumina [1]

Mature esi-miR3465-3p

• Accession: MIMAT0017792
• Description: Ectocarpus siliculosus esi-miR3465-3p mature miRNA
• Sequence: 111 - UCCUGGUAGAUCUUCAGUUGGUC - 133
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20520714
   The Ectocarpus genome and the independent evolution of multicellularity in brown algae
   "Cock JM, Sterck L, Rouze P, Scornet D, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, Boyen C, Brownlee C, Carrano CJ, Charrier B, Cho GY, Coelho SM, Collen J, Corre E, Da Sil"
   "Nature (2010) 465:617-621