Stem-loop ppy-mir-130a

Accession

MI0014822

Description

Pongo pygmaeus ppy-mir-130a precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

ugcugcuggccagagcucuuuucacauugugcuacugucugcaccugucacuagCAGUGCAAUGUUAAAAGGGCAUuggccguguagug
.((((((((((((.((((((((.((((((((((.(((...((....))...))).)))))))))).)))))))).))))))).))))).

Structure

u     -       a        c          a   ucu  a 
 gcugc uggccag gcucuuuu acauugugcu cug   gc c
 ||||| ||||||| |||||||| |||||||||| |||   ||  
 ugaug gccgguU CGGGAAAA UGUAACGUGA gau   ug c
g     u       A        U          C   cac  u 

Annotation confidence Not enough data

Genome context

chr11: 19239577-19239665 [-]

Mature ppy-miR-130a

• Accession: MIMAT0015753
• Description: Pongo pygmaeus ppy-miR-130a mature miRNA
• Sequence: 55 - CAGUGCAAUGUUAAAAGGGCAU - 76
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64