Stem-loop bfl-mir-4863

Accession

MI0017618

Description

Branchiostoma floridae bfl-mir-4863 precursor miRNA

Gene family

MIPF0001778; mir-4863

Sequence

ccuugccuggucaugcAGACAACAUCAGAAUGUCCCUACggguuuguguaguuaguaggGCCAUUUUGUGUUGUCAGCaggaccagugcacuu
...(((((((((.(((.(((((((.(((((((.((((((...............)))))).)))))))))))))).))).)))))).)))...

Structure

ccu   -      a   A       U       U      ggguuu 
   ugc cugguc ugc GACAACA CAGAAUG CCCUAC      g
   ||| |||||| ||| ||||||| ||||||| ||||||      u
   acg gaccag aCG CUGUUGU GUUUUAC Gggaug      g
uuc   u      g   A       -       C      auugau 

Annotation confidence Not enough data

Genome context

GG666556.1: 536779-536871 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-4863

Mature bfl-miR-4863-5p

• Accession: MIMAT0020095
• Description: Branchiostoma floridae bfl-miR-4863-5p mature miRNA
• Sequence: 17 - AGACAACAUCAGAAUGUCCCUAC - 39
• Evidence: experimental ; 454 [1]

Mature bfl-miR-4863-3p

• Accession: MIMAT0020096
• Description: Branchiostoma floridae bfl-miR-4863-3p mature miRNA
• Sequence: 60 - GCCAUUUUGUGUUGUCAGC - 78
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27