Stem-loop xbo-mir-2012

Accession

MI0017689

Description

Xenoturbella bocki xbo-mir-2012 precursor miRNA

Sequence

guauuggccuauggacauUAGUAUUGGCCUAUGGACAUUGguauuggccuauggacauugguauuggcccauaggccucauaauggcucaggggcccuguuaauaucccaugggcccug
.....((((((((((.(((((((..(((((.(((.(((((.....(((((((((.((.......))..)))))))))...)))))..))).))))).))))))).).)))))))))...

Structure

guauu         - c       UU     A   -A     guauu         -a  uu 
     ggccuaugg a auUAGUA  GGCCU UGG  CAUUG     ggccuaugg  ca  g
     ||||||||| | |||||||  ||||| |||  |||||     |||||||||  ||  g
     ccggguacc u uaauugu  ccggg acu  guaau     ccggauacc  gu  u
--guc         c a       -c     g   cg     --acu         cg  ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature xbo-miR-2012

• Accession: MIMAT0020123
• Description: Xenoturbella bocki xbo-miR-2012 mature miRNA
• Sequence: 19 - UAGUAUUGGCCUAUGGACAUUG - 40
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21307940
   Acoelomorph flatworms are deuterostomes related to Xenoturbella
   "Philippe H, Brinkmann H, Copley RR, Moroz LL, Nakano H, Poustka AJ, Wallberg A, Peterson KJ, Telford MJ"
   "Nature (2011) 470:255-258