Stem-loop gma-MIR169h

Accession

MI0017912

Description

Glycine max gma-MIR169h precursor miRNA

Literature search

23 open access papers mention gma-MIR169h
(99 sentences)

Sequence

gugcuuuugagccaaggaugacuugccggcguauguuugaucucuucuaggacuguugccGGCGAGACAUCUUGGCUCAUUggugcucucuuuccacucauaugagacucuagaaagagcuugauugaaaggaugauguccaauaauugug
(.(((....))))..((((........((((...((((((.....))..))))...))))...((((((((..........)))).))))..(((..(((...(((.((((....)))))))...)))..)))....))))..........

Structure

gugcuuuugagccaa    ---gacuugccggcguauguuugaucucuucuaggacuguugccGGC    -    UUGG 
               ggau                                               GAGA CAUC    C
               ||||                                               |||| ||||     
               ccug                                               cucu gugg    U
-----guguuaauaa    uaguaggaaaguuaguucgagaaagaucucagaguauacucaccuuu    c    UUAC 

Annotation confidence Not enough data

Genome context

chr9: 5330689-5330839 [+]

Mature gma-miR169h

• Accession: MIMAT0021062
• Description: Glycine max gma-miR169h mature miRNA
• Sequence: 61 - GGCGAGACAUCUUGGCUCAUU - 81
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21751852
   Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome
   "Radwan O, Liu Y, Clough SJ"
   "Mol Plant Microbe Interact (2011) 24:958-972