Stem-loop asu-mir-124

Accession

MI0018567

Description

Ascaris suum asu-mir-124 precursor miRNA

Gene family

MIPF0000021; mir-124

Literature search

1 open access papers mention asu-mir-124
(6 sentences)

Sequence

uuugcgacaCGCCUUCACCGGUGACUUUGGUgugaagcagccuacUAAGGCACGCGGUGAAUGCCAaucgcucuug
...((((...((.((((((((((.((((((((.(......).))))))))))).))))))).))...)))).....

Structure

--uuu    caC  C       -   A        u aa 
     gcga   GC UUCACCG GUG CUUUGGUg g  g
     ||||   || ||||||| ||| |||||||| |   
     cgcu   CG AAGUGGC CAC GGAAUcau c  c
guucu    aAC  U       G   -        c ga 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-124-5p

• Accession: MIMAT0021495
• Description: Ascaris suum asu-miR-124-5p mature miRNA
• Sequence: 10 - CGCCUUCACCGGUGACUUUGGU - 31
• Evidence: experimental ; Illumina [1]

Mature asu-miR-124-3p

• Accession: MIMAT0021496
• Description: Ascaris suum asu-miR-124-3p mature miRNA
• Sequence: 46 - UAAGGCACGCGGUGAAUGCCA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477