Stem-loop asu-mir-250

Accession

MI0018573

Description

Ascaris suum asu-mir-250 precursor miRNA

Sequence

gacggcaucuaACUGGCAGUUGACUGUUGAUCCGucguaucgaaucgAAUCACAGCCAAACUGUUGGUUAgguucaguu
(((.(.((((((((((((((((.((((.(((.(((((...)))..)).))))))).).))))))))))))))).).)))

Structure

   g c               - A    U   C  --   u 
gac g aucuaACUGGCAGUU G CUGU GAU CG  ucg  
||| | ||||||||||||||| | |||| ||| ||  ||| a
uug c uggAUUGGUUGUCAA C GACA CUA gc  agc  
   a u               A C    -   A  ua   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-250-5p

• Accession: MIMAT0021507
• Description: Ascaris suum asu-miR-250-5p mature miRNA
• Sequence: 12 - ACUGGCAGUUGACUGUUGAUCCG - 34
• Evidence: experimental ; Illumina [1]

Mature asu-miR-250-3p

• Accession: MIMAT0021508
• Description: Ascaris suum asu-miR-250-3p mature miRNA
• Sequence: 48 - AAUCACAGCCAAACUGUUGGUUA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477