Stem-loop asu-mir-67

Accession

MI0018581

Description

Ascaris suum asu-mir-67 precursor miRNA

Sequence

gggcacuuAGCUCGCUCGGCUGGUUGUUAGAUGuuucugauguucaUCACAACCUCCUUGAGUGAGUUGAaagcccuc
((((..(((((((((((((..((((((..((((...........))))))))))..).))))))))))))..))))..

Structure

--    ac            - CU      UA    uuuc 
  gggc  uuAGCUCGCUCG G  GGUUGU  GAUG    u
  ||||  |||||||||||| |  ||||||  ||||    g
  cccg  AGUUGAGUGAGU C  CCAACA  CUac    a
cu    aa            U CU      --    uugu 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-67-5p

• Accession: MIMAT0021523
• Description: Ascaris suum asu-miR-67-5p mature miRNA
• Sequence: 9 - AGCUCGCUCGGCUGGUUGUUAGAUG - 33
• Evidence: experimental ; Illumina [1]

Mature asu-miR-67-3p

• Accession: MIMAT0021524
• Description: Ascaris suum asu-miR-67-3p mature miRNA
• Sequence: 47 - UCACAACCUCCUUGAGUGAGUUGA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477