Stem-loop asu-mir-5364

Accession

MI0018615

Description

Ascaris suum asu-mir-5364 precursor miRNA

Sequence

ugaacucAGCUAAUGGACUUUACUUCCUCUGCuuaauuuuucugcAGAGGUAUUGUUUAUUGGCUAAgaucaaagcucgagc
(((.((.(((((((((((..((...(((((((...........)))))))))..))))))))))).)).)))..........

Structure

----------   a  c           UU  CUU       uuaa 
          uga cu AGCUAAUGGAC  UA   CCUCUGC    u
          ||| || |||||||||||  ||   |||||||    u
          acu gA UCGGUUAUUUG  AU   GGAGAcg    u
cgagcucgaa   a  A           UU  ---       ucuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-5364-5p

• Accession: MIMAT0021590
• Description: Ascaris suum asu-miR-5364-5p mature miRNA
• Sequence: 8 - AGCUAAUGGACUUUACUUCCUCUGC - 32
• Evidence: experimental ; Illumina [1]

Mature asu-miR-5364-3p

• Accession: MIMAT0021591
• Description: Ascaris suum asu-miR-5364-3p mature miRNA
• Sequence: 46 - AGAGGUAUUGUUUAUUGGCUAA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477