Stem-loop aca-mir-489

Accession

MI0018877

Description

Anolis carolinensis aca-mir-489 precursor miRNA

Sequence

gugauggcuuggUGGUCGUAUGUAUGACGUCAUUuacuuguucuuuuaggaGUGACAUCAUAUGUACGGCUGCuaaacugccacaugggac
(((.(((((((((((((((((((((((.((((((..((((......)))))))))).)))))))))))))))))))...))))))).....

Structure

-----   a    ---                   C      ua    uu 
     gug uggc   uuggUGGUCGUAUGUAUGA GUCAUU  cuug  c
     ||| ||||   ||||||||||||||||||| ||||||  ||||   
     uac accg   aauCGUCGGCAUGUAUACU CAGUGa  ggau  u
caggg   -    uca                   A      --    uu 

Annotation confidence Not enough data

Genome context

chr6: 21750899-21750989 [-]

Mature aca-miR-489-5p

• Accession: MIMAT0021974
• Description: Anolis carolinensis aca-miR-489-5p mature miRNA
• Sequence: 13 - UGGUCGUAUGUAUGACGUCAUU - 34
• Evidence: experimental ; Illumina [1]

Mature aca-miR-489-3p

• Accession: MIMAT0021975
• Description: Anolis carolinensis aca-miR-489-3p mature miRNA
• Sequence: 52 - GUGACAUCAUAUGUACGGCUGC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107