Stem-loop aca-mir-499

Accession

MI0018880

Description

Anolis carolinensis aca-mir-499 precursor miRNA

Sequence

cuugagggggaggcagUUAAGACUUGCAGUGAUGUUUAgaaaauuuacuacaugAACAUCACUUUAAGUCUGUGCUacuucuuuccuuaucu
..(((((((((((.(((..(((((((.(((((((((((..............))))))))))).)))))))..))).)))).)))))))...

Structure

-cu       -    c   UA       C           gaaaau 
   ugagggg gagg agU  AGACUUG AGUGAUGUUUA      u
   ||||||| |||| |||  ||||||| |||||||||||       
   auuccuu cuuc UCG  UCUGAAU UCACUACAAgu      u
ucu       u    a   UG       U           acauca 

Annotation confidence Not enough data

Genome context

chr4: 135451067-135451158 [+]

Mature aca-miR-499-5p

• Accession: MIMAT0021980
• Description: Anolis carolinensis aca-miR-499-5p mature miRNA
• Sequence: 17 - UUAAGACUUGCAGUGAUGUUUA - 38
• Evidence: experimental ; Illumina [1]

Mature aca-miR-499-3p

• Accession: MIMAT0021981
• Description: Anolis carolinensis aca-miR-499-3p mature miRNA
• Sequence: 55 - AACAUCACUUUAAGUCUGUGCU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107