Stem-loop ssl-MIR166b

Accession

MI0019344

Description

Salvia sclarea ssl-MIR166b precursor miRNA

Gene family

MIPF0000004; MIR166

Sequence

ggggaaugcuguuugguucgagaucauccgagcuucggugucaucuacggacauuccaucguauggucUCGGACCAGGCUUCAUUCCCC
((((((((..(((((((((((((((((.(((.....((((((.......))))))...))).)))))))))))))))))..))))))))

Structure

        cu                 c   gcuuc      au 
ggggaaug  guuugguucgagaucau cga     gguguc  c
||||||||  ||||||||||||||||| |||     ||||||  u
CCCCUUAC  CGGACCAGGCUcuggua gcu     uuacag  a
        UU                 u   --acc      gc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssl-miR166b

• Accession: MIMAT0022510
• Description: Salvia sclarea ssl-miR166b mature miRNA
• Sequence: 69 - UCGGACCAGGCUUCAUUCCCC - 89
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19840835
   One-step identification of conserved miRNAs, their targets, potential transcription factors and effector genes of complete secondary metabolism pathways after 454 pyrosequencing of calyx cDNAs from the Labiate Salvia sclarea L
   "Legrand S, Valot N, Nicole F, Moja S, Baudino S, Jullien F, Magnard JL, Caissard JC, Legendre L"
   "Gene (2010) 450:55-62