Stem-loop tur-mir-12b

Accession

MI0019367

Description

Tetranychus urticae tur-mir-12b precursor miRNA

Sequence

gaugcacaagaggUGAGUAUUUCUCCAGGUACUGAugaguugaguugauUAGUACCUGGAAAAUUAACUCACcucuuguuguauca
((((((((((((((((((((((.(((((((((((((.((.....)).)))))))))))))))))..)))))))))))).)))))).

Structure

-      -            --    C             g  u 
 gaugca caagaggUGAGU  AUUU UCCAGGUACUGAu ag u
 |||||| ||||||||||||  |||| ||||||||||||| || g
 cuaugu guucucCACUCA  UAAA AGGUCCAUGAUua uu a
a      u            AU    -             g  g 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-12b-5p

• Accession: MIMAT0023044
• Description: Tetranychus urticae tur-miR-12b-5p mature miRNA
• Sequence: 14 - UGAGUAUUUCUCCAGGUACUGA - 35
• Evidence: experimental ; Illumina [1]

Mature tur-miR-12b-3p

• Accession: MIMAT0023045
• Description: Tetranychus urticae tur-miR-12b-3p mature miRNA
• Sequence: 50 - UAGUACCUGGAAAAUUAACUCAC - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492