Stem-loop tur-mir-281

Accession

MI0019368

Description

Tetranychus urticae tur-mir-281 precursor miRNA

Gene family

MIPF0000087; mir-46

Sequence

ggucaucaucaugAAGAGAGCUUAUCCGUAGACAGuauuuaaucguuuccacUGUCAUGGAGUUGCUCUCUUUCuggucugaccu
(((((..((((.(((((((((...(((((.((((((..............)))))))))))...))))))))).)))).))))).

Structure

-     uc    u         UUA     A      auuuaa 
 gguca  auca gAAGAGAGC   UCCGU GACAGu      u
 |||||  |||| |||||||||   ||||| ||||||       
 ccagu  uggu UUUCUCUCG   AGGUA CUGUca      c
u     -c    C         UUG     -      ccuuug 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-281-5p

• Accession: MIMAT0023046
• Description: Tetranychus urticae tur-miR-281-5p mature miRNA
• Sequence: 14 - AAGAGAGCUUAUCCGUAGACAG - 35
• Evidence: experimental ; Illumina [1]

Mature tur-miR-281-3p

• Accession: MIMAT0023047
• Description: Tetranychus urticae tur-miR-281-3p mature miRNA
• Sequence: 53 - UGUCAUGGAGUUGCUCUCUUUC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492