Stem-loop ola-mir-203

Accession

MI0019543

Description

Oryzias latipes ola-mir-203 precursor miRNA

Gene family

MIPF0000108; mir-203

Sequence

aaauguguugucauucugauuaagugguucucaacaguucaacaguucuuugagaaaauuGUGAAAUGUUUAGGACCACUUGaccagucagacaaaugcuaccgucuuu
....((((((((...(((.((((((((((((.((((.((((.(((((((...)))..)))))))).)))).)))))))))))).)))...))).)))))..........

Structure

------aaau     -   auu   a            c    g    a    --   u 
          guguu guc   cug uuaagugguucu aaca uuca cagu  ucu  
          ||||| |||   ||| |||||||||||| |||| |||| ||||  ||| u
          cguaa cag   gac aGUUCACCAGGA UUGU AAGU Guua  aga  
uuucugccau     a   acu   c            U    A    -    aa   g 

Annotation confidence Not enough data

Genome context

22: 12363247-12363355 [-]

Mature ola-miR-203

• Accession: MIMAT0022655
• Description: Oryzias latipes ola-miR-203 mature miRNA
• Sequence: 61 - GUGAAAUGUUUAGGACCACUUG - 82
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21143817
   Discovery and characterization of medaka miRNA genes by next generation sequencing platform
   Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
   BMC Genomics (2010) 11:S8