Stem-loop dpr-MIR166a

Accession

MI0020200

Description

Digitalis purpurea dpr-MIR166a precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

1 open access papers mention dpr-MIR166a
(3 sentences)

Sequence

uguguuugugggggauguuggcuggugcgacgcaaccacguuuuugcaguuaauucugagauagaaaaaaacgugauggcaUCGGACCAGGCUUCAUUCCUCucaaacccg
.(.(((((.((((((((..(.(((((.(((.((...(((((((((........(((((...))))))))))))))...)).))).))))).)..)))))))).))))).).

Structure

u u     u        uu g     g   c  aac         gcaguuaa     a 
 g guuug gggggaug  g cuggu cga gc   cacguuuuu        uucug  
 | ||||| ||||||||  | ||||| ||| ||   |||||||||        ||||| g
 c caaac CUCCUUAC  C GACCA GCU cg   gugcaaaaa        aagau  
g c     u        UU G     G   a  gua         --------     a 

Annotation confidence Not enough data

Genome context

Unknown

Mature dpr-miR166a

• Accession: MIMAT0023529
• Description: Digitalis purpurea dpr-miR166a mature miRNA
• Sequence: 82 - UCGGACCAGGCUUCAUUCCUC - 102
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 22233149
   Comprehensive transcriptome analysis reveals novel genes involved in cardiac glycoside biosynthesis and mlncRNAs associated with secondary metabolism and stress response in Digitalis purpurea
   Wu B, Li Y, Yan H, Ma Y, Luo H, Yuan L, Chen S, Lu S
   BMC Genomics (2012) 13:15