Stem-loop bna-MIR168b

Accession

MI0020275

Description

Brassica napus bna-MIR168b precursor miRNA

Gene family

MIPF0000081; MIR168

Literature search

8 open access papers mention bna-MIR168b
(18 sentences)

Sequence

accgucuugcucggauUCGCUUGGUGCAGGUCGAGAAcuaauugucuaacacauccacgaaguuuuacuugcugguuugugagcagggauuggaucccgccuugcaucaauugaaucggagcccugaucg
...(((..((((.((((((.((((((((((.((.((.((((((.(....((((.(((..((((...))))..)))..))))....).)))))).)).)).)))))))))).)))))).))))...)))..

Structure

acc   -uu    g      C          U  A  A      g cuaa    -u   cg    u 
   guc   gcuc gauUCG UUGGUGCAGG CG GA cuaauu u    caca  cca  aagu  
   |||   |||| |||||| |||||||||| || || |||||| |    ||||  |||  |||| u
   uag   cgag cuaagu aacuacguuc gc cu gguuag g    gugu  ggu  uuca  
-gc   ucc    g      u          c  c  a      g acga    uu   cg    u 

Annotation confidence Not enough data

Genome context

EM:EV007136: 150-279 [+]

Mature bna-miR168b

• Accession: MIMAT0023628
• Description: Brassica napus bna-miR168b mature miRNA
• Sequence: 17 - UCGCUUGGUGCAGGUCGAGAA - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823