Stem-loop mml-mir-1296

Accession

MI0020876

Description

Macaca mulatta mml-mir-1296 precursor miRNA

Sequence

1917 reads, 17 reads per million, 9 experiments

gaaucaccuaccuaacugggUUAGGGCCCUGGCUCCAUCUCCUuuaggaaaaccuucugugggGAGUGGGGCUUCGACCCUAACCcaggugggcuguaacacugcuguauuu
....(((((((((....(((((((((....(((((((.((((((..((((....))))..)))))))))))))....)))))))))))))))).))................

Structure

------------gaau  -       aacu         CCCU       U      ua    a 
                ca ccuaccu    gggUUAGGG    GGCUCCA CUCCUu  ggaa a
                || |||||||    |||||||||    ||||||| ||||||  ||||  
                gu gggugga    cCCAAUCCC    UCGGGGU GAGggg  ucuu c
uuuaugucgucacaau  c       ----         AGCU       -      ug    c 

Annotation confidence Not enough data

Genome context

chr9: 69347312-69347423 [+]

Mature mml-miR-1296-5p

• Accession: MIMAT0024328
• Description: Macaca mulatta mml-miR-1296-5p mature miRNA
• Sequence: 21 - UUAGGGCCCUGGCUCCAUCUCCU - 43
• Evidence: experimental ; Illumina [1-2]

Mature mml-miR-1296-3p

• Accession: MIMAT0027114
• Description: Macaca mulatta mml-miR-1296-3p mature miRNA
• Sequence: 64 - GAGUGGGGCUUCGACCCUAACC - 85
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45