Stem-loop mse-mir-279c

Accession

MI0020999

Description

Manduca sexta mse-mir-279c precursor miRNA

Gene family

MIPF0000184; mir-279

Sequence

agugcaugacaagacgcggccuccucggacgauaaguggauaucuauuucaaguuaacgcucaauucuUGACUAGAUUUUCACUUAUCCUcugcguaggcca
.(((..(....)..)))(((((.(.((((.((((((((((.(((((..(((((.............))))).))))).)))))))))).)))).).))))).

Structure

agugcaugacaagacgc     c u    c          u     uu     uuaac 
                 ggccu c cgga gauaagugga aucua  ucaag     g
                 ||||| | |||| |||||||||| |||||  |||||     c
                 ccgga g gucU CUAUUCACUU UAGAU  AGUuc     u
----------------a     u c    C          U     -C     uuaac 

Annotation confidence Not enough data

Genome context

JH668350.1: 897910-898011 [-]

Mature mse-miR-279c

• Accession: MIMAT0024450
• Description: Manduca sexta mse-miR-279c mature miRNA
• Sequence: 69 - UGACUAGAUUUUCACUUAUCCU - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22406339
   Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
   "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
   "Insect Biochem Mol Biol (2012) 42:381-395