Stem-loop pgi-MIR6135i

Accession

MI0021301

Description

Panax ginseng pgi-MIR6135i precursor miRNA

Gene family

MIPF0001644; MIR6135

Literature search

1 open access papers mention pgi-MIR6135i
(10 sentences)

Sequence

gguuagcaugaaguuauuuuuuuaaguaaguugauuAAUUGGCCAAUAGAAUACUGACACacauacaaccucaccugcgugucauuauucuauuggucaauugaccaacuuacccaaaaauaaacuucauacuaacc
((((((.((((((((((((((....((((((((.(((((((((((((((((((.((((((.((............)).)))))).))))))))))))))))))).))))))))..)))))).)))))))).))))))

Structure

      c        -      uuaa        a                   C      a  uacaa 
gguuag augaaguu auuuuu    guaaguug uuAAUUGGCCAAUAGAAUA UGACAC ca     c
|||||| |||||||| ||||||    |||||||| ||||||||||||||||||| |||||| ||      
ccaauc uacuucaa uaaaaa    cauucaac aguuaacugguuaucuuau acugug gu     c
      a        a      --cc        c                   u      c  ccacu 

Annotation confidence Not enough data

Genome context

Unknown

Mature pgi-miR6135i

• Accession: MIMAT0027250
• Description: Panax ginseng pgi-miR6135i mature miRNA
• Sequence: 37 - AAUUGGCCAAUAGAAUACUGACAC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22962612
   High-throughput sequencing and characterization of the small RNA transcriptome reveal features of novel and conserved microRNAs in Panax ginseng
   Wu B, Wang M, Ma Y, Yuan L, Lu S
   PLoS One (2012) 7:e44385