Stem-loop pgi-MIR391

Accession

MI0021303

Description

Panax ginseng pgi-MIR391 precursor miRNA

Sequence

agcaugggaagguuuucuaUGCAGGAGAGAUGACGCCCAUCcguacgcaaagcaagaucaauuauccucuuaaucaccagcuguguaaggagagagagguuaauugaguuggugcaugggcgggcgccauuuccccugcauacaaaaucuuuuaugcu
(((((((.((((((((.((((((((.((((((.(((((.(((((.(((..(((....(((((((.((((((..((..((....))....))..)))))).)))))))))).))).))))).))))).)))))).)))))))).)))))))))))))))

Structure

       g        c        A      A     A     a   aa   aaga       u      aa  --ac  g 
agcaugg aagguuuu uaUGCAGG GAGAUG CGCCC UCcgu cgc  agc    ucaauua ccucuu  uc    ca c
||||||| |||||||| |||||||| |||||| ||||| ||||| |||  |||    ||||||| ||||||  ||    ||  
ucguauu uucuaaaa auacgucc cuuuac gcggg gggua gug  uug    aguuaau ggagag  ag    gu u
       -        c        c      c     c     c   -g   ----       u      ag  gaau  g 

Annotation confidence Not enough data

Genome context

Unknown

Mature pgi-miR391

• Accession: MIMAT0027252
• Description: Panax ginseng pgi-miR391 mature miRNA
• Sequence: 20 - UGCAGGAGAGAUGACGCCCAUC - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22962612
   High-throughput sequencing and characterization of the small RNA transcriptome reveal features of novel and conserved microRNAs in Panax ginseng
   Wu B, Wang M, Ma Y, Yuan L, Lu S
   PLoS One (2012) 7:e44385