Stem-loop hme-mir-11

Accession

MI0021729

Description

Heliconius melpomene hme-mir-11 precursor miRNA

Sequence

gcguccuggcuggcugcggucaccgcgucccguggcuaguacucgcgcugugacauguguugccagccaCAUCACAGUCAGAGUUCUAGCUauacggcgcgguucaucggcgguacuauagaaggggaac
...((((..((((((((.(..((((((((..((((((((.((((..(((((((..((((........)))))))))))..)))).))))))))..))))))))....).)))))....)))..))))...

Structure

gcg    gg   ----     g --uc        cc        u    gc       ca    uug 
   uccu  cug    gcugc g    accgcguc  guggcuag acuc  gcuguga  ugug   c
   ||||  |||    ||||| |    ||||||||  |||||||| ||||  |||||||  ||||    
   gggg  gau    uggcg c    uggcgcgg  uaUCGAUC UGAG  UGACACU  ACac   c
caa    aa   auca     g uacu        ca        U    AC       --    cga 

Annotation confidence Not enough data

Genome context

HE672080: 326718-326847 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hme-mir-11

Mature hme-miR-11

• Accession: MIMAT0024934
• Description: Heliconius melpomene hme-miR-11 mature miRNA
• Sequence: 70 - CAUCACAGUCAGAGUUCUAGCU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22722851
   Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
   "The Heliconius Genome Consortium"
   "Nature (2012) 487:94-98