miRBase entry: hme-mir-279b

Stem-loop hme-mir-279b

Accession

MI0021759

Description

Heliconius melpomene hme-mir-279b precursor miRNA

Sequence

cuugaagauaauuggaaaaauuuugcaaucaguuaauggguauaagucuagugucacagugugcauuugUGACUAGAUCUACACUCAUUGAuugcuugcaaacaaaucuucaag
(((((((((..(((.......(((((((.((((((((((((.((.(((((..(((((((.......)))))))))))).)).)))))))))))).)))))))))))))))))))

Structure

         aa   gaaaaau       u            a  a     gu       ug 
cuugaagau  uug       uuugcaa caguuaaugggu ua gucua  gucacag  u
|||||||||  |||       ||||||| |||||||||||| || |||||  |||||||  g
gaacuucua  aac       aaacguu guuAGUUACUCA AU UAGAU  CAGUguu  c
         --   -------       c            C  C     --       ua

Annotation confidence Not enough data

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Genome context

HE670979: 5099-5212 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hme-mir-279b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature hme-miR-279b

Accession	MIMAT0024964
Description	Heliconius melpomene hme-miR-279b mature miRNA
Sequence	70 - UGACUAGAUCUACACUCAUUGA - 91
Evidence	experimental Illumina [1]

References

PubMed ID: 22722851
Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
"The Heliconius Genome Consortium"
"Nature (2012) 487:94-98