miRBase entry: hme-mir-3338

Stem-loop hme-mir-3338

Accession

MI0021778

Description

Heliconius melpomene hme-mir-3338 precursor miRNA

Sequence

uuggacaaaauuauaagaauguuucauagcaaacacaguaguguacaaugcuaaguugacauacgcAUGUACUUACUUUGUUUGUUCUggaaucuucuuuaagcuacaacuuggagaaugccuaa
....................((((((.((((((((.(((((.(((((.(((.............))))))))))))).)))))))).)))))).(((((((((......))))))))).......

Structure

------------uuggacaaaauuauaagaau      u        c     u     a   uaagu 
                                guuuca agcaaaca aguag guaca ugc     u
                                |||||| |||||||| ||||| ||||| |||     g
                                uaaggU UUGUUUGU UCAUU CAUGU Acg     a
aauccguaagagguucaacaucgaauuucuuc      C        U     -     -   cauac

Annotation confidence Not enough data

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Genome context

HE671311: 86489-86613 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hme-mir-3338

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature hme-miR-3338

Accession	MIMAT0024982
Description	Heliconius melpomene hme-miR-3338 mature miRNA
Sequence	67 - AUGUACUUACUUUGUUUGUUCU - 88
Evidence	experimental Illumina [1]

References

PubMed ID: 22722851
Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
"The Heliconius Genome Consortium"
"Nature (2012) 487:94-98