Stem-loop hme-mir-6301-1

Accession

MI0021801

Description

Heliconius melpomene hme-mir-6301-1 precursor miRNA

Gene family

MIPF0001556; mir-6301

Sequence

cauacgagguuaCGUCAUACGAAGAAUUGGUAUguuaaguuuuaCCAGUUCAUCGUCUGACGUUUAacuuccuaug
((((.((((((((((((.((((.(((((((((..........))))))))).)))).))))))..)))))).))))

Structure

    c      --      U    A         Uguu 
caua gagguu  aCGUCA ACGA GAAUUGGUA    a
|||| ||||||  |||||| |||| |||||||||     
guau cuucaA  UGCAGU UGCU CUUGACCau    a
    c      UU      C    A         uuug 

Annotation confidence Not enough data

Genome context

HE671389: 229316-229391 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from hme-mir-6301-1

Mature hme-miR-6301-1-5p

• Accession: MIMAT0025004
• Description: Heliconius melpomene hme-miR-6301-1-5p mature miRNA
• Sequence: 13 - CGUCAUACGAAGAAUUGGUAU - 33
• Evidence: experimental ; Illumina [1]

Mature hme-miR-6301-3p

• Accession: MIMAT0025005
• Description: Heliconius melpomene hme-miR-6301-3p mature miRNA
• Sequence: 45 - CCAGUUCAUCGUCUGACGUUUA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22722851
   Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
   "The Heliconius Genome Consortium"
   "Nature (2012) 487:94-98