miRBase entry: hme-mir-6301-2

Stem-loop hme-mir-6301-2

Accession

MI0021802

Description

Heliconius melpomene hme-mir-6301-2 precursor miRNA

Gene family

MIPF0001556; mir-6301

Sequence

ucaugcgaaguAGCGUCAGACGGGGAAUUGGUAUguugcaaguucuaCCAGUUCAUCGUCUGACGUUUAaguucccauga
(((((.(((..((((((((((((.(((((((((............))))))))).))))))))))))....))).)))))

Structure

     c   --gu            G         Uguug 
ucaug gaa    AGCGUCAGACGG GAAUUGGUA     c
||||| |||    |||||||||||| |||||||||      
aguac cuu    UUGCAGUCUGCU CUUGACCau     a
     c   gaAU            A         cuuga

Annotation confidence Not enough data

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Genome context

HE671389: 229561-229640 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from hme-mir-6301-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature hme-miR-6301-3p

Accession	MIMAT0025005
Description	Heliconius melpomene hme-miR-6301-3p mature miRNA
Sequence	48 - CCAGUUCAUCGUCUGACGUUUA - 69
Evidence	experimental Illumina [1]

Mature hme-miR-6301-2-5p

Accession	MIMAT0026470
Description	Heliconius melpomene hme-miR-6301-2-5p mature miRNA
Sequence	12 - AGCGUCAGACGGGGAAUUGGUAU - 34
Evidence	experimental Illumina [1]

References

PubMed ID: 22722851
Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
"The Heliconius Genome Consortium"
"Nature (2012) 487:94-98