Stem-loop ssc-mir-29b-2

Accession

MI0022126

Description

Sus scrofa ssc-mir-29b-2 precursor miRNA

Literature search

28 open access papers mention ssc-mir-29b-2
(68 sentences)

Sequence

34 reads, 60 reads per million, 7 experiments

cuucuggaagcugguuucacaugguggcuuagauuuuuccaucuuuguaucUAGCACCAUUUGAAAUCAGUGUUuuaggaguaa
(((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).)))))))))...

Structure

---         -          c      g  u    uuuucc 
   cuucuggaa gcugguuuca auggug cu agau      a
   ||||||||| |||||||||| |||||| || ||||       
   gaggauuUU UGACUAAAGU UACCAC GA Ucua      u
aau         G          U      -  -    uguuuc 

Annotation confidence Not enough data

Genome context

chr9: 148552438-148552521 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ssc-mir-29b-2

Mature ssc-miR-29b

• Accession: MIMAT0002137
• Description: Sus scrofa ssc-miR-29b mature miRNA
• Sequence: 52 - UAGCACCAUUUGAAAUCAGUGUU - 74
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100