Stem-loop hex-MIR390a

Accession

MI0022249

Description

Helianthus exilis hex-MIR390a precursor miRNA

Gene family

MIPF0000101; MIR390

Sequence

aaacaacauaagaagaauAAGCUCAGGAGGGAUAGCGCCaugauuguuaucgaaagguugacaaguguugcuucauucggccaucauauugaaccagauuguauaggaguaucaa
....................((((.((..((((((((.(((..((((((.(.....).))))))))).))))..))))..)).(((...)))..............)))).....

Structure

aaacaacauaagaagaauAA    -----------------------A  AG    --    C   ga      u g 
                    GCUC                        GG  GGAU  AGCG Cau  uuguua c a
                    ||||                        ||  ||||  |||| |||  |||||| | a
                    ugag                        cc  cuua  ucgu gug  aacagu g a
---------------aacua    gauauguuagaccaaguuauacua  gg    cu    u   --      u g 

Annotation confidence Not enough data

Genome context

Unknown

Mature hex-miR390a

• Accession: MIMAT0025509
• Description: Helianthus exilis hex-miR390a mature miRNA
• Sequence: 19 - AAGCUCAGGAGGGAUAGCGCC - 39
• Evidence: not_experimental

References

1. PubMed ID: 21670966
   Identification of MicroRNAs and their targets in Helianthus
   "Barozai MY, Baloch IA, Din M"
   "Mol Biol Rep (2012) 39:2523-2532