Stem-loop cme-MIR166h

Accession

MI0023212

Description

Cucumis melo cme-MIR166h precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

1 open access papers mention cme-MIR166h
(5 sentences)

Sequence

uugugaggaauguuggcuggcucgaggcuuuucaaaacaaagauguucuuuuuucuuuuuuuuuuccuuuuuuucaacuuggaaaaagaagagaaaagaaaagaagagagaacuuuuaggcuUCGGACCAGGCUUCAUUCCCCucaacucaaa
(((.(.((((((..(.((((.(((((((((.........((((.(((((((((((((((((((((.(((((((((......).)))))))).)))))))))))))))))))))))))))))))))).)))).)..)))))).).)))......

Structure

------   u a      uu g    c         uucaaaaca    u                     c        - aa 
      uug g ggaaug  g cugg ucgaggcuu         aaga guucuuuuuucuuuuuuuuuu cuuuuuuu c  c
      ||| | ||||||  | |||| |||||||||         |||| ||||||||||||||||||||| |||||||| |   
      aac C CCUUAC  C GACC GGCUucgga         uuuu caagagagaagaaaagaaaag gaagaaaa g  u
aaacuc   u C      UU G    A         ---------    -                     a        a gu 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR166h

• Accession: MIMAT0026108
• Description: Cucumis melo cme-miR166h mature miRNA
• Sequence: 123 - UCGGACCAGGCUUCAUUCCCC - 143
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877