Stem-loop mdo-mir-34c

Accession

MI0023815

Description

Monodelphis domestica mdo-mir-34c precursor miRNA

Sequence

667599 reads, 28654 reads per million, 5 experiments

AGGCAGUGUAGUUAGCUGAUUGCuagcaguaguaccAAUCACUAACCACACAGCCAAG
.(((.((((.(((((.(((((((((....)))...))))))))))).)))).)))...

Structure

--A   A    A     C      ---   g 
   GGC GUGU GUUAG UGAUUG   Cua c
   ||| |||| ||||| ||||||   |||  
   CCG CACA CAAUC ACUAAc   gau a
GAA   A    C     -      cau   g 

Annotation confidence High

Genome context

chr4: 241888509-241888566 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mdo-mir-34c

Mature mdo-miR-34c-5p

• Accession: MIMAT0028586
• Description: Monodelphis domestica mdo-miR-34c-5p mature miRNA
• Sequence: 1 - AGGCAGUGUAGUUAGCUGAUUGC - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-34c-3p

• Accession: MIMAT0028587
• Description: Monodelphis domestica mdo-miR-34c-3p mature miRNA
• Sequence: 37 - AAUCACUAACCACACAGCCAAG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45