Stem-loop mdo-mir-7386f

Accession

MI0023992

Description

Monodelphis domestica mdo-mir-7386f precursor miRNA

Sequence

5295 reads, 306 reads per million, 5 experiments

ACUCGGAUGAGGCACUCUAUuuugugcaucccuccaaaauAAAUGCCUCAUCCUUGGGA
.(((((((((((((...(((((((..........)))))))..))))))))))..))).

Structure

A   --          CUC       ugca 
 CUC  GGAUGAGGCA   UAUuuug    u
 |||  ||||||||||   |||||||     
 GGG  CCUACUCCGU   Auaaaac    c
A   UU          -AA       cucc 

Annotation confidence High

Genome context

chrX: 40491868-40491926 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from mdo-mir-7386f

Mature mdo-miR-7386f-5p

• Accession: MIMAT0028856
• Description: Monodelphis domestica mdo-miR-7386f-5p mature miRNA
• Sequence: 1 - ACUCGGAUGAGGCACUCUAU - 20
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7386f-3p

• Accession: MIMAT0028857
• Description: Monodelphis domestica mdo-miR-7386f-3p mature miRNA
• Sequence: 41 - AAAUGCCUCAUCCUUGGGA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45