Stem-loop mdo-mir-7398r

Accession

MI0024018

Description

Monodelphis domestica mdo-mir-7398r precursor miRNA

Sequence

3696 reads, 63 reads per million, 5 experiments

UUGUGUAGAGGCAAGAAAUAUGCuguauucacucuugguAUAUUUCUCGCCUCUACCAAUU
(((.((((((((.((((((((((((..........)))))))))))).)))))))))))..

Structure

--   U        A            uauu 
  UUG GUAGAGGC AGAAAUAUGCug    c
  ||| |||||||| ||||||||||||     
  AAC CAUCUCCG UCUUUAUAuggu    a
UU   -        C            ucuc 

Annotation confidence High

Genome context

chrX: 57283471-57283531 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from mdo-mir-7398r

Mature mdo-miR-7398r-5p

• Accession: MIMAT0028902
• Description: Monodelphis domestica mdo-miR-7398r-5p mature miRNA
• Sequence: 1 - UUGUGUAGAGGCAAGAAAUAUGC - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398r-3p

• Accession: MIMAT0028903
• Description: Monodelphis domestica mdo-miR-7398r-3p mature miRNA
• Sequence: 40 - AUAUUUCUCGCCUCUACCAAUU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45