Stem-loop ghr-MIR7500

Accession

MI0024189

Description

Gossypium hirsutum ghr-MIR7500 precursor miRNA

Sequence

aguuaaacaaAUCGAGUUAUUCGAGUUAAUCGAGuuaucgaaucaccucgaauuuuuuuuuucgaauuucgaguucgaaucaguugagcuuucgaaauucgaauaacucgaaauauuucgaa
...........(((((.(((((((((((.(((((((.((((......(((((........))))).....((((((((.....))))))))))))))))))).))))))).)))).))))).

Structure

aguuaaacaaA     U    -       A       a    aucaccucgaauuuuuuuuuucgaauuuc        a 
           UCGAG UAUU CGAGUUA UCGAGuu ucga                             gaguucga u
           ||||| |||| ||||||| ||||||| ||||                             |||||||| c
           agcuu auaa gcucaau agcuuaa agcu                             uucgaguu a
----------a     u    a       a       -    -----------------------------        g 

Annotation confidence Not enough data

Genome context

Unknown

Mature ghr-miR7500

• Accession: MIMAT0029147
• Description: Gossypium hirsutum ghr-miR7500 mature miRNA
• Sequence: 11 - AUCGAGUUAUUCGAGUUAAUCGAG - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138860
   A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
   "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
   "Mol Plant (2012) 5:889-900