Stem-loop ipu-mir-338-2

Accession

MI0024621

Description

Ictalurus punctatus ipu-mir-338-2 precursor miRNA

Gene family

MIPF0000097; mir-338

Sequence

aacaauauccugaugcugaaugaguguguugaaggaaacUCCAGCAUCAGUGAUUUUGUUG
(((((.((((((((((((...((((............))))))))))))).))).))))).

Structure

-     u   -         aau    guguu 
 aacaa auc cugaugcug   gagu     g
 ||||| ||| |||||||||   ||||      
 UUGUU UAG GACUACGAC   CUca     a
G     U   U         ---    aagga 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-338

• Accession: MIMAT0029502
• Description: Ictalurus punctatus ipu-miR-338 mature miRNA
• Sequence: 40 - UCCAGCAUCAGUGAUUUUGUUG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174