Stem-loop ipu-mir-7563a

Accession

MI0024696

Description

Ictalurus punctatus ipu-mir-7563a precursor miRNA

Gene family

MIPF0001709; mir-7563

Sequence

AACCGCGUACUUGCCUACUAUAggacuguaguagacgaaauacauguaucuccgcuacuauauagaaggcaaguacgcgguuug
((((((((((((((((.(((((.....(((((.((.((.((....)).)))).)))))..))))).))))))))))))))))..

Structure

--                A     ggacu     a  c  a  a 
  AACCGCGUACUUGCCU CUAUA     guagu ga ga au c
  |||||||||||||||| |||||     ||||| || || ||  
  uuggcgcaugaacgga gauau     caucg cu cu ug a
gu                a     ---au     c  -  a  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-7563a

• Accession: MIMAT0029560
• Description: Ictalurus punctatus ipu-miR-7563a mature miRNA
• Sequence: 1 - AACCGCGUACUUGCCUACUAUA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174